Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TBC1D3FA6NER0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 PMS2P2-201ENST00000425039 1128 ntBASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TBC1D3FA6NER0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
TBC1D3FA6NER0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 SLC25A6P5-201ENST00000435663 894 ntBASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 AL513480.1-201ENST00000451731 511 ntBASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TBC1D3FA6NER0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 ELL2P1-201ENST00000413990 1906 ntBASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 AC254562.1-201ENST00000417586 456 ntBASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 FAM185BP-201ENST00000443595 716 ntBASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 PAWRP1-201ENST00000451083 565 ntBASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.13■□□□□ 0.33
TBC1D3FA6NER0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms