Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC66A2RUB6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 AL603756.1-201ENST00000606511 2163 ntBASIC18.75■□□□□ 0.59
CCDC66A2RUB6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 LINC01451-201ENST00000623792 534 ntBASIC18.75■□□□□ 0.59
CCDC66A2RUB6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 KRT89P-201ENST00000620027 1478 ntBASIC18.75■□□□□ 0.59
CCDC66A2RUB6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC66A2RUB6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.74■□□□□ 0.59
CCDC66A2RUB6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC66A2RUB6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC66A2RUB6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms