Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.05■□□□□ -0
SHISA3A0PJX4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SHISA3A0PJX4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.05■□□□□ -0
SHISA3A0PJX4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SHISA3A0PJX4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
SHISA3A0PJX4 AC104640.1-201ENST00000562617 2109 ntBASIC15.05■□□□□ -0
SHISA3A0PJX4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 AL391807.1-203ENST00000604392 2365 ntBASIC15.05■□□□□ -0
SHISA3A0PJX4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.05■□□□□ -0
SHISA3A0PJX4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SHISA3A0PJX4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SHISA3A0PJX4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SHISA3A0PJX4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.04■□□□□ -0
SHISA3A0PJX4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.04■□□□□ -0
SHISA3A0PJX4 AC068472.1-201ENST00000474589 881 ntBASIC15.04■□□□□ -0
SHISA3A0PJX4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.04■□□□□ -0
SHISA3A0PJX4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.04■□□□□ -0
SHISA3A0PJX4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.04■□□□□ -0
SHISA3A0PJX4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.04■□□□□ -0
SHISA3A0PJX4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SHISA3A0PJX4 Z99916.2-201ENST00000604037 246 ntBASIC15.04■□□□□ -0
SHISA3A0PJX4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SHISA3A0PJX4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHISA3A0PJX4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.04■□□□□ -0
SHISA3A0PJX4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 MTHFR-217ENST00000641820 1569 ntBASIC15.03■□□□□ -0
SHISA3A0PJX4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.03■□□□□ -0
SHISA3A0PJX4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 CYP2D8P-201ENST00000433633 1490 ntBASIC15.03■□□□□ -0
SHISA3A0PJX4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.03■□□□□ -0
SHISA3A0PJX4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.03■□□□□ -0
SHISA3A0PJX4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.03■□□□□ -0
SHISA3A0PJX4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SHISA3A0PJX4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.03■□□□□ -0
SHISA3A0PJX4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.03■□□□□ -0
SHISA3A0PJX4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 AC109462.3-201ENST00000573934 613 ntBASIC15.03■□□□□ -0
SHISA3A0PJX4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.03■□□□□ -0
SHISA3A0PJX4 FAM87A-204ENST00000613235 858 ntBASIC15.03■□□□□ -0
SHISA3A0PJX4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHISA3A0PJX4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms