Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 AC100803.2-201ENST00000562459 1963 ntBASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX49Q9Y6V7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 GUSBP12-201ENST00000513727 720 ntBASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX49Q9Y6V7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 AP002469.2-201ENST00000531724 424 ntBASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 AL160237.2-201ENST00000556165 472 ntBASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 SLC25A6P4-201ENST00000586535 553 ntBASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 Z69720.1-201ENST00000601483 472 ntBASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 AL353801.3-201ENST00000609898 542 ntBASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX49Q9Y6V7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.77■□□□□ 0.91
DDX49Q9Y6V7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
DDX49Q9Y6V7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.77■□□□□ 0.91
DDX49Q9Y6V7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 TSPY12P-201ENST00000421279 868 ntBASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms