Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 AC009102.3-201ENST00000623118 1491 ntBASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 AL163051.1-201ENST00000569214 1512 ntBASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP4B1Q9Y6B7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 LINC01311-201ENST00000565162 1445 ntBASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 AL121956.5-201ENST00000625261 221 ntBASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.63■□□□□ 0.25
AP4B1Q9Y6B7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 MIR149-201ENST00000384879 89 ntBASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 HYMAI.1-201ENST00000620949 238 ntBASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP4B1Q9Y6B7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.61■□□□□ 0.25
AP4B1Q9Y6B7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4B1Q9Y6B7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
AP4B1Q9Y6B7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.61■□□□□ 0.25
AP4B1Q9Y6B7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP4B1Q9Y6B7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP4B1Q9Y6B7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms