Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CLIC4Q9Y696 TNRC18P3-201ENST00000441896 2691 ntBASIC19.7■□□□□ 0.74
CLIC4Q9Y696 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 ATP5G2P1-201ENST00000433580 426 ntBASIC19.7■□□□□ 0.74
CLIC4Q9Y696 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 AC099336.1-202ENST00000602961 463 ntBASIC19.7■□□□□ 0.74
CLIC4Q9Y696 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLIC4Q9Y696 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 POM121L3P-201ENST00000419331 1163 ntBASIC19.69■□□□□ 0.74
CLIC4Q9Y696 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 NUS1P1-201ENST00000446295 882 ntBASIC19.69■□□□□ 0.74
CLIC4Q9Y696 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 AC012615.1-201ENST00000565797 1299 ntBASIC19.69■□□□□ 0.74
CLIC4Q9Y696 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLIC4Q9Y696 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 ARMC10P1-201ENST00000313754 855 ntBASIC19.68■□□□□ 0.74
CLIC4Q9Y696 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 MIR5100-201ENST00000579544 119 ntBASIC19.68■□□□□ 0.74
CLIC4Q9Y696 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLIC4Q9Y696 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLIC4Q9Y696 AC004817.3-201ENST00000602957 2129 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms