Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 AL138688.1-201ENST00000624851 1594 ntBASIC16.94■□□□□ 0.3
PCDHB11Q9Y5F2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 UPF3AP3-201ENST00000420996 769 ntBASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 PKD1P1-201ENST00000458669 6805 ntBASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHB11Q9Y5F2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 AC003669.1-201ENST00000334569 611 ntBASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 RNA5SP416-201ENST00000516838 111 ntBASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 PGAM5P1-201ENST00000518923 814 ntBASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 AC105339.3-201ENST00000560043 636 ntBASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 AC040169.1-201ENST00000565382 521 ntBASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 STK25P1-201ENST00000585406 838 ntBASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 AL139327.4-201ENST00000612362 153 ntBASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 AC008735.5-201ENST00000623544 497 ntBASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHB11Q9Y5F2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms