Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSX2IPQ9Y2D8 AC068880.1-201ENST00000507289 2297 ntBASIC18.58■□□□□ 0.56
SSX2IPQ9Y2D8 AC009336.1-201ENST00000608941 1553 ntBASIC18.58■□□□□ 0.56
SSX2IPQ9Y2D8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSX2IPQ9Y2D8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSX2IPQ9Y2D8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSX2IPQ9Y2D8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSX2IPQ9Y2D8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSX2IPQ9Y2D8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 AP002414.1-201ENST00000391405 1147 ntBASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 MKNK2P1-201ENST00000437526 628 ntBASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 YBX1P5-201ENST00000509441 847 ntBASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 C20orf181-201ENST00000623918 480 ntBASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSX2IPQ9Y2D8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 AC097637.2-201ENST00000624096 1997 ntBASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SSX2IPQ9Y2D8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 SNHG9-202ENST00000564014 471 ntBASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms