Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 PTCHD3P3-201ENST00000403073 906 ntBASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 AC124947.2-201ENST00000547118 1133 ntBASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 FRMD8P1-201ENST00000440433 1524 ntBASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHA4Q9UN74 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 AP001005.1-201ENST00000571755 1248 ntBASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHA4Q9UN74 AC012313.1-201ENST00000593393 3059 ntBASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 AP002414.3-201ENST00000589352 1468 ntBASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 AP002414.1-201ENST00000391405 1147 ntBASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 FDX1P1-201ENST00000449115 551 ntBASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 AC136632.2-201ENST00000512891 861 ntBASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 AL805961.1-202ENST00000641562 540 ntBASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 AC060834.1-201ENST00000443027 2032 ntBASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 HLA-A-201ENST00000376802 1334 ntBASIC19.67■□□□□ 0.74
PCDHA4Q9UN74 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms