Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 AL512384.1-201ENST00000406683 331 ntBASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 GNAQP1-201ENST00000444815 1067 ntBASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 IGHV3-42-201ENST00000520410 361 ntBASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 MIR4259-201ENST00000584466 101 ntBASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 AC087163.2-201ENST00000457299 853 ntBASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 AL009183.1-201ENST00000603760 355 ntBASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
LRP1BQ9NZR2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AC140912.1-201ENST00000577171 1054 ntBASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AC004233.3-201ENST00000607794 1269 ntBASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AC004840.1-201ENST00000636359 365 ntBASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 MYCLP1-201ENST00000372451 1075 ntBASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 BNIP3P42-201ENST00000454982 569 ntBASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AC073389.1-201ENST00000595595 795 ntBASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 BNIP3P29-201ENST00000598302 571 ntBASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AC011447.5-201ENST00000616168 564 ntBASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AL161645.1-201ENST00000622716 1255 ntBASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LRP1BQ9NZR2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 AL031055.1-201ENST00000606362 631 ntBASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms