Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ARHGEF38Q9NXL2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 AC008894.3-201ENST00000624324 3103 ntBASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 MRPL3P1-201ENST00000400109 1033 ntBASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 LINC00982-205ENST00000420957 435 ntBASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 RPS2P1-201ENST00000434010 821 ntBASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 AC009078.2-202ENST00000463353 338 ntBASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 AC107918.4-202ENST00000641623 219 ntBASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 NCF1C-201ENST00000438382 1427 ntBASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ARHGEF38Q9NXL2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 AC116353.5-201ENST00000638148 1699 ntBASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 AC141586.5-201ENST00000624546 2050 ntBASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 SLC25A1P3-201ENST00000395415 828 ntBASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 AC139887.3-201ENST00000568585 713 ntBASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.96■□□□□ 0.47
ARHGEF38Q9NXL2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.96■□□□□ 0.46
ARHGEF38Q9NXL2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
ARHGEF38Q9NXL2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
ARHGEF38Q9NXL2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ARHGEF38Q9NXL2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ARHGEF38Q9NXL2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms