Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 RPS2P1-201ENST00000434010 821 ntBASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 FAM197Y8-203ENST00000450145 560 ntBASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 AC106886.4-201ENST00000623557 2502 ntBASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.16■□□□□ 0.66
BLOC1S4Q9NUP1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 AC006504.4-201ENST00000592118 1568 ntBASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.15■□□□□ 0.66
BLOC1S4Q9NUP1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BLOC1S4Q9NUP1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
BLOC1S4Q9NUP1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
BLOC1S4Q9NUP1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.14■□□□□ 0.66
BLOC1S4Q9NUP1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 AC004870.1-201ENST00000315132 882 ntBASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 ELK2BP-201ENST00000415014 1224 ntBASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 LAGE3P1-201ENST00000425356 484 ntBASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 KRT18P27-201ENST00000427733 1299 ntBASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S4Q9NUP1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S4Q9NUP1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms