Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC080080.1-201ENST00000625121 2420 ntBASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 FRMD8P1-201ENST00000440433 1524 ntBASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 RPS2P28-201ENST00000314255 741 ntBASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 PTCHD3P3-201ENST00000403073 906 ntBASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 AC124947.2-201ENST00000547118 1133 ntBASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 MIR7706-201ENST00000613747 67 ntBASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 AC138932.1-201ENST00000534164 6830 ntBASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 AC060834.1-201ENST00000443027 2032 ntBASIC20.99■□□□□ 0.95
ECHDC1Q9NTX5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 AL662844.1-201ENST00000546340 181 ntBASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 AC105339.3-201ENST00000560043 636 ntBASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 AP002414.3-201ENST00000589352 1468 ntBASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ECHDC1Q9NTX5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 AP002414.1-201ENST00000391405 1147 ntBASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 AC136632.2-201ENST00000512891 861 ntBASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 AL805961.1-202ENST00000641562 540 ntBASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 HLA-A-201ENST00000376802 1334 ntBASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms