Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 AL162727.3-201ENST00000635661 2787 ntBASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 AC006116.8-202ENST00000587620 1550 ntBASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 AKR1C7P-201ENST00000305623 895 ntBASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 EMBP1-201ENST00000458200 901 ntBASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 AC122714.2-201ENST00000502787 707 ntBASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 RN7SL510P-201ENST00000581311 263 ntBASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 LINC01711-201ENST00000598340 967 ntBASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 AL121894.2-201ENST00000602977 491 ntBASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NECTIN3Q9NQS3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 BX276092.7-203ENST00000637198 1536 ntBASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NECTIN3Q9NQS3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
NECTIN3Q9NQS3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.58■□□□□ 0.25
NECTIN3Q9NQS3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.58■□□□□ 0.25
NECTIN3Q9NQS3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NECTIN3Q9NQS3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms