Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 SPDYE21P-201ENST00000413323 827 ntBASIC14.79□□□□□ -0.04
GCM1Q9NP62 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 AL139288.1-201ENST00000623748 933 ntBASIC14.79□□□□□ -0.04
GCM1Q9NP62 AC073592.4-201ENST00000623827 446 ntBASIC14.79□□□□□ -0.04
GCM1Q9NP62 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.79□□□□□ -0.04
GCM1Q9NP62 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GCM1Q9NP62 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 SIGLEC16-201ENST00000599858 1437 ntBASIC14.78□□□□□ -0.04
GCM1Q9NP62 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.78□□□□□ -0.04
GCM1Q9NP62 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 AL020989.1-201ENST00000422979 469 ntBASIC14.78□□□□□ -0.04
GCM1Q9NP62 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 STK19B-204ENST00000512515 211 ntBASIC14.78□□□□□ -0.04
GCM1Q9NP62 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 AC104692.2-201ENST00000603054 253 ntBASIC14.78□□□□□ -0.04
GCM1Q9NP62 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GCM1Q9NP62 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.78□□□□□ -0.04
GCM1Q9NP62 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.77□□□□□ -0.04
GCM1Q9NP62 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.77□□□□□ -0.04
GCM1Q9NP62 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.77□□□□□ -0.04
GCM1Q9NP62 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
GCM1Q9NP62 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 AL160237.2-201ENST00000556165 472 ntBASIC14.77□□□□□ -0.05
GCM1Q9NP62 NKAPP1-205ENST00000585790 367 ntBASIC14.77□□□□□ -0.05
GCM1Q9NP62 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 AL139327.4-201ENST00000612362 153 ntBASIC14.77□□□□□ -0.05
GCM1Q9NP62 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
GCM1Q9NP62 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GCM1Q9NP62 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms