Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 AC211486.1-202ENST00000416371 468 ntBASIC18.56■□□□□ 0.56
NXF3Q9H4D5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 AL513480.1-201ENST00000451731 511 ntBASIC18.56■□□□□ 0.56
NXF3Q9H4D5 AC211476.1-201ENST00000503899 468 ntBASIC18.56■□□□□ 0.56
NXF3Q9H4D5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 AC007064.4-201ENST00000637740 555 ntBASIC18.56■□□□□ 0.56
NXF3Q9H4D5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.56■□□□□ 0.56
NXF3Q9H4D5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 DNAJB3-202ENST00000449667 1266 ntBASIC18.55■□□□□ 0.56
NXF3Q9H4D5 AC074386.1-202ENST00000463561 864 ntBASIC18.55■□□□□ 0.56
NXF3Q9H4D5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 AL138688.1-201ENST00000624851 1594 ntBASIC18.55■□□□□ 0.56
NXF3Q9H4D5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NXF3Q9H4D5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 AC092919.2-201ENST00000623631 1645 ntBASIC18.54■□□□□ 0.56
NXF3Q9H4D5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 EGFEM1P-202ENST00000431685 1563 ntBASIC18.54■□□□□ 0.56
NXF3Q9H4D5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.54■□□□□ 0.56
NXF3Q9H4D5 HTR7P1-202ENST00000624664 4411 ntBASIC18.54■□□□□ 0.56
NXF3Q9H4D5 BCL2-203ENST00000589955 5011 ntBASIC18.54■□□□□ 0.56
NXF3Q9H4D5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 AC129492.6-201ENST00000611383 1305 ntBASIC18.53■□□□□ 0.56
NXF3Q9H4D5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NXF3Q9H4D5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms