Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 ABCD1P5-201ENST00000445663 754 ntBASIC15.42■□□□□ 0.06
NELFAQ9H3P2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 EMBP1-201ENST00000458200 901 ntBASIC15.42■□□□□ 0.06
NELFAQ9H3P2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 AC106795.1-205ENST00000512851 1056 ntBASIC15.42■□□□□ 0.06
NELFAQ9H3P2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 AL691432.3-201ENST00000621860 400 ntBASIC15.42■□□□□ 0.06
NELFAQ9H3P2 AP000867.4-201ENST00000641616 219 ntBASIC15.42■□□□□ 0.06
NELFAQ9H3P2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
NELFAQ9H3P2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 PMPCAP1-201ENST00000508114 1576 ntBASIC15.41■□□□□ 0.06
NELFAQ9H3P2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 AF238378.1-201ENST00000526806 358 ntBASIC15.41■□□□□ 0.06
NELFAQ9H3P2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 RN7SL510P-201ENST00000581311 263 ntBASIC15.41■□□□□ 0.06
NELFAQ9H3P2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NELFAQ9H3P2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms