Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 RCC2P3-201ENST00000418112 1537 ntBASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 AC004980.1-204ENST00000429707 299 ntBASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 AL355355.2-201ENST00000442321 338 ntBASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 AC026271.3-201ENST00000571884 352 ntBASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NIPSNAP3BQ9BS92 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 TSPY7P-201ENST00000431358 1114 ntBASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 AC104640.1-201ENST00000562617 2109 ntBASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 KRT8P11-201ENST00000409686 1436 ntBASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 AL161772.1-201ENST00000610494 4412 ntBASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
NIPSNAP3BQ9BS92 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 DBET-201ENST00000630918 3363 ntBASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NIPSNAP3BQ9BS92 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms