Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SLC38A3Q99624 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SLC38A3Q99624 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SLC38A3Q99624 GPX1P2-201ENST00000429271 606 ntBASIC16.74■□□□□ 0.27
SLC38A3Q99624 SLC25A6P5-201ENST00000435663 894 ntBASIC16.74■□□□□ 0.27
SLC38A3Q99624 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC38A3Q99624 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC38A3Q99624 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC38A3Q99624 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC38A3Q99624 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC38A3Q99624 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC38A3Q99624 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 RPSAP43-201ENST00000402237 625 ntBASIC16.73■□□□□ 0.27
SLC38A3Q99624 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.73■□□□□ 0.27
SLC38A3Q99624 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 HCG4B-203ENST00000450128 991 ntBASIC16.73■□□□□ 0.27
SLC38A3Q99624 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 AC018845.2-201ENST00000568326 409 ntBASIC16.73■□□□□ 0.27
SLC38A3Q99624 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 AL691403.2-201ENST00000618460 490 ntBASIC16.73■□□□□ 0.27
SLC38A3Q99624 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 LINC00304-203ENST00000565008 1864 ntBASIC16.73■□□□□ 0.27
SLC38A3Q99624 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC38A3Q99624 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC38A3Q99624 AC006116.8-202ENST00000587620 1550 ntBASIC16.72■□□□□ 0.27
SLC38A3Q99624 AL590787.1-201ENST00000568856 1315 ntBASIC16.72■□□□□ 0.27
SLC38A3Q99624 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 AC112482.1-201ENST00000492080 688 ntBASIC16.72■□□□□ 0.27
SLC38A3Q99624 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 AC002310.6-201ENST00000624451 1377 ntBASIC16.72■□□□□ 0.27
SLC38A3Q99624 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC38A3Q99624 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC38A3Q99624 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC38A3Q99624 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC38A3Q99624 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC38A3Q99624 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms