Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
MUC4Q99102 AC092068.3-201ENST00000587894 2016 ntBASIC12.64□□□□□ -0.39
MUC4Q99102 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
MUC4Q99102 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
MUC4Q99102 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MUC4Q99102 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.64□□□□□ -0.39
MUC4Q99102 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.64□□□□□ -0.39
MUC4Q99102 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
MUC4Q99102 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.63□□□□□ -0.39
MUC4Q99102 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.63□□□□□ -0.39
MUC4Q99102 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
MUC4Q99102 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.63□□□□□ -0.39
MUC4Q99102 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
MUC4Q99102 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 AC007967.3-201ENST00000434308 558 ntBASIC12.63□□□□□ -0.39
MUC4Q99102 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MUC4Q99102 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.63□□□□□ -0.39
MUC4Q99102 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.63□□□□□ -0.39
MUC4Q99102 AC120114.3-201ENST00000611923 658 ntBASIC12.63□□□□□ -0.39
MUC4Q99102 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MUC4Q99102 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.63□□□□□ -0.39
MUC4Q99102 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
MUC4Q99102 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.63□□□□□ -0.39
MUC4Q99102 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.63□□□□□ -0.39
MUC4Q99102 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.63□□□□□ -0.39
MUC4Q99102 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.63□□□□□ -0.39
MUC4Q99102 AL353801.3-201ENST00000609898 542 ntBASIC12.63□□□□□ -0.39
MUC4Q99102 AL139327.4-201ENST00000612362 153 ntBASIC12.63□□□□□ -0.39
MUC4Q99102 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MUC4Q99102 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.62□□□□□ -0.39
MUC4Q99102 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.62□□□□□ -0.39
MUC4Q99102 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
MUC4Q99102 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.62□□□□□ -0.39
MUC4Q99102 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.62□□□□□ -0.39
MUC4Q99102 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.62□□□□□ -0.39
MUC4Q99102 AC091607.1-201ENST00000490318 1060 ntBASIC12.62□□□□□ -0.39
MUC4Q99102 UNC93B7-201ENST00000509439 705 ntBASIC12.62□□□□□ -0.39
MUC4Q99102 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.62□□□□□ -0.39
MUC4Q99102 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.62□□□□□ -0.39
MUC4Q99102 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.62□□□□□ -0.39
MUC4Q99102 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.62□□□□□ -0.39
MUC4Q99102 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 AL662844.4-201ENST00000606367 2838 ntBASIC12.62□□□□□ -0.39
MUC4Q99102 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.62□□□□□ -0.39
MUC4Q99102 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.62□□□□□ -0.39
MUC4Q99102 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.62□□□□□ -0.39
MUC4Q99102 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.62□□□□□ -0.39
MUC4Q99102 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
MUC4Q99102 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 AC093525.9-201ENST00000624961 1746 ntBASIC12.62□□□□□ -0.39
MUC4Q99102 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.62□□□□□ -0.39
MUC4Q99102 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MUC4Q99102 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms