Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 AC109635.5-201ENST00000533593 962 ntBASIC15.4■□□□□ 0.06
SPENQ96T58 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.4■□□□□ 0.06
SPENQ96T58 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.4■□□□□ 0.06
SPENQ96T58 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.4■□□□□ 0.06
SPENQ96T58 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.4■□□□□ 0.06
SPENQ96T58 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SPENQ96T58 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SPENQ96T58 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.4■□□□□ 0.06
SPENQ96T58 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SPENQ96T58 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.4■□□□□ 0.06
SPENQ96T58 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SPENQ96T58 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.4■□□□□ 0.06
SPENQ96T58 AC140878.1-201ENST00000565277 250 ntBASIC15.4■□□□□ 0.06
SPENQ96T58 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.4■□□□□ 0.06
SPENQ96T58 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPENQ96T58 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.39■□□□□ 0.05
SPENQ96T58 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.39■□□□□ 0.05
SPENQ96T58 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.39■□□□□ 0.05
SPENQ96T58 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SPENQ96T58 FOXO1B-201ENST00000504678 1527 ntBASIC15.39■□□□□ 0.05
SPENQ96T58 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.39■□□□□ 0.05
SPENQ96T58 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SPENQ96T58 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SPENQ96T58 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.39■□□□□ 0.05
SPENQ96T58 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SPENQ96T58 ATP5G2P4-201ENST00000442175 420 ntBASIC15.39■□□□□ 0.05
SPENQ96T58 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.39■□□□□ 0.05
SPENQ96T58 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SPENQ96T58 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.39■□□□□ 0.05
SPENQ96T58 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.39■□□□□ 0.05
SPENQ96T58 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.39■□□□□ 0.05
SPENQ96T58 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.39■□□□□ 0.05
SPENQ96T58 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SPENQ96T58 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.38■□□□□ 0.05
SPENQ96T58 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.38■□□□□ 0.05
SPENQ96T58 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPENQ96T58 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPENQ96T58 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.38■□□□□ 0.05
SPENQ96T58 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.38■□□□□ 0.05
SPENQ96T58 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.38■□□□□ 0.05
SPENQ96T58 AC026150.2-201ENST00000564693 1156 ntBASIC15.38■□□□□ 0.05
SPENQ96T58 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.38■□□□□ 0.05
SPENQ96T58 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.38■□□□□ 0.05
SPENQ96T58 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPENQ96T58 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.38■□□□□ 0.05
SPENQ96T58 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPENQ96T58 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPENQ96T58 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPENQ96T58 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPENQ96T58 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.38■□□□□ 0.05
SPENQ96T58 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPENQ96T58 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.38■□□□□ 0.05
SPENQ96T58 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.38■□□□□ 0.05
SPENQ96T58 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.38■□□□□ 0.05
SPENQ96T58 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.38■□□□□ 0.05
SPENQ96T58 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.38■□□□□ 0.05
SPENQ96T58 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SPENQ96T58 LINC00304-203ENST00000565008 1864 ntBASIC15.38■□□□□ 0.05
SPENQ96T58 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SPENQ96T58 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPENQ96T58 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SPENQ96T58 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.38■□□□□ 0.05
SPENQ96T58 AC116407.2-201ENST00000613639 860 ntBASIC15.38■□□□□ 0.05
SPENQ96T58 SPDYE12P-201ENST00000618416 771 ntBASIC15.38■□□□□ 0.05
SPENQ96T58 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.38■□□□□ 0.05
SPENQ96T58 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SPENQ96T58 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.37■□□□□ 0.05
SPENQ96T58 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.37■□□□□ 0.05
SPENQ96T58 AC046185.3-201ENST00000623228 1824 ntBASIC15.37■□□□□ 0.05
SPENQ96T58 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.37■□□□□ 0.05
SPENQ96T58 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms