Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 UNC93B4-201ENST00000505679 747 ntBASIC16.29■□□□□ 0.2
NR1H4Q96RI1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 C1QL1P1-201ENST00000568105 661 ntBASIC16.29■□□□□ 0.2
NR1H4Q96RI1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NR1H4Q96RI1 AC009949.1-201ENST00000623048 1830 ntBASIC16.29■□□□□ 0.2
NR1H4Q96RI1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 PRKY-204ENST00000533551 1019 ntBASIC16.28■□□□□ 0.2
NR1H4Q96RI1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 AC006538.1-201ENST00000567905 1585 ntBASIC16.28■□□□□ 0.2
NR1H4Q96RI1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 AL009178.2-201ENST00000597278 2719 ntBASIC16.28■□□□□ 0.2
NR1H4Q96RI1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H4Q96RI1 LINC01311-201ENST00000565162 1445 ntBASIC16.28■□□□□ 0.2
NR1H4Q96RI1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms