Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP1S3Q96PC3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 KRT18P23-201ENST00000435622 1283 ntBASIC13.11□□□□□ -0.31
AP1S3Q96PC3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 SLC25A1P4-201ENST00000567977 778 ntBASIC13.11□□□□□ -0.31
AP1S3Q96PC3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.11□□□□□ -0.31
AP1S3Q96PC3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 AL355312.1-201ENST00000407115 2176 ntBASIC13.1□□□□□ -0.31
AP1S3Q96PC3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 AC133963.1-201ENST00000504166 1679 ntBASIC13.1□□□□□ -0.31
AP1S3Q96PC3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms