Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 AL049757.1-201ENST00000616842 1596 ntBASIC16.68■□□□□ 0.26
RNF31Q96EP0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 AL139384.1-201ENST00000612143 3047 ntBASIC16.68■□□□□ 0.26
RNF31Q96EP0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 COX5BP2-201ENST00000392354 334 ntBASIC16.68■□□□□ 0.26
RNF31Q96EP0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 LAGE3P1-201ENST00000425356 484 ntBASIC16.68■□□□□ 0.26
RNF31Q96EP0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 KRT18P2-201ENST00000447938 1258 ntBASIC16.68■□□□□ 0.26
RNF31Q96EP0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 AC018845.2-201ENST00000568326 409 ntBASIC16.68■□□□□ 0.26
RNF31Q96EP0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF31Q96EP0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF31Q96EP0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.67■□□□□ 0.26
RNF31Q96EP0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 KLF4P1-201ENST00000412782 1185 ntBASIC16.67■□□□□ 0.26
RNF31Q96EP0 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 AC108751.1-201ENST00000490852 363 ntBASIC16.67■□□□□ 0.26
RNF31Q96EP0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 DUTP2-201ENST00000519164 463 ntBASIC16.67■□□□□ 0.26
RNF31Q96EP0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 AC019129.2-201ENST00000609837 1235 ntBASIC16.67■□□□□ 0.26
RNF31Q96EP0 MIR1199-201ENST00000621445 119 ntBASIC16.67■□□□□ 0.26
RNF31Q96EP0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF31Q96EP0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF31Q96EP0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 AC073621.1-201ENST00000392730 636 ntBASIC16.66■□□□□ 0.26
RNF31Q96EP0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 AC122714.2-201ENST00000502787 707 ntBASIC16.66■□□□□ 0.26
RNF31Q96EP0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms