Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.87□□□□□ -0.03
USP9XQ93008 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USP9XQ93008 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.87□□□□□ -0.03
USP9XQ93008 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USP9XQ93008 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.87□□□□□ -0.03
USP9XQ93008 AL512343.1-201ENST00000605837 169 ntBASIC14.87□□□□□ -0.03
USP9XQ93008 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.87□□□□□ -0.03
USP9XQ93008 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
USP9XQ93008 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
USP9XQ93008 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USP9XQ93008 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USP9XQ93008 KRT8P44-201ENST00000441609 1350 ntBASIC14.87□□□□□ -0.03
USP9XQ93008 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
USP9XQ93008 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
USP9XQ93008 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
USP9XQ93008 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USP9XQ93008 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.87□□□□□ -0.03
USP9XQ93008 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.86□□□□□ -0.03
USP9XQ93008 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.86□□□□□ -0.03
USP9XQ93008 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.86□□□□□ -0.03
USP9XQ93008 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
USP9XQ93008 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.86□□□□□ -0.03
USP9XQ93008 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.86□□□□□ -0.03
USP9XQ93008 ZNF890P-202ENST00000530367 1156 ntBASIC14.86□□□□□ -0.03
USP9XQ93008 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.86□□□□□ -0.03
USP9XQ93008 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
USP9XQ93008 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
USP9XQ93008 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.86□□□□□ -0.03
USP9XQ93008 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
USP9XQ93008 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 RHOQP1-201ENST00000555758 579 ntBASIC14.86□□□□□ -0.03
USP9XQ93008 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
USP9XQ93008 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
USP9XQ93008 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.86□□□□□ -0.03
USP9XQ93008 AC004840.1-201ENST00000636359 365 ntBASIC14.86□□□□□ -0.03
USP9XQ93008 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.86□□□□□ -0.03
USP9XQ93008 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.86□□□□□ -0.03
USP9XQ93008 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.86□□□□□ -0.03
USP9XQ93008 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USP9XQ93008 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
USP9XQ93008 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.85□□□□□ -0.03
USP9XQ93008 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.85□□□□□ -0.03
USP9XQ93008 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.85□□□□□ -0.03
USP9XQ93008 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
USP9XQ93008 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.85□□□□□ -0.03
USP9XQ93008 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.85□□□□□ -0.03
USP9XQ93008 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.85□□□□□ -0.03
USP9XQ93008 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.85□□□□□ -0.03
USP9XQ93008 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.85□□□□□ -0.03
USP9XQ93008 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.85□□□□□ -0.03
USP9XQ93008 AL844908.2-201ENST00000609461 460 ntBASIC14.85□□□□□ -0.03
USP9XQ93008 AC018529.1-201ENST00000613063 361 ntBASIC14.85□□□□□ -0.03
USP9XQ93008 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.85□□□□□ -0.03
USP9XQ93008 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.85□□□□□ -0.03
USP9XQ93008 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 AL023806.1-201ENST00000603994 1649 ntBASIC14.85□□□□□ -0.03
USP9XQ93008 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 AC046185.3-201ENST00000623228 1824 ntBASIC14.85□□□□□ -0.03
USP9XQ93008 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 AC016027.1-202ENST00000607927 1699 ntBASIC14.85□□□□□ -0.03
USP9XQ93008 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.85□□□□□ -0.03
USP9XQ93008 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
USP9XQ93008 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
USP9XQ93008 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
USP9XQ93008 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
USP9XQ93008 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USP9XQ93008 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.84□□□□□ -0.03
USP9XQ93008 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.84□□□□□ -0.03
USP9XQ93008 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
USP9XQ93008 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USP9XQ93008 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.84□□□□□ -0.03
USP9XQ93008 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
USP9XQ93008 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.84□□□□□ -0.03
USP9XQ93008 AL139099.5-201ENST00000635274 300 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms