Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNED1Q8TER0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.81■□□□□ 0.92
SNED1Q8TER0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SNED1Q8TER0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 UXT-AS1-201ENST00000590504 1525 ntBASIC20.8■□□□□ 0.92
SNED1Q8TER0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.8■□□□□ 0.92
SNED1Q8TER0 RNU1-129P-201ENST00000384064 167 ntBASIC20.8■□□□□ 0.92
SNED1Q8TER0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.8■□□□□ 0.92
SNED1Q8TER0 IGHV3-42-201ENST00000520410 361 ntBASIC20.8■□□□□ 0.92
SNED1Q8TER0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 U1.21-201ENST00000580816 167 ntBASIC20.8■□□□□ 0.92
SNED1Q8TER0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.8■□□□□ 0.92
SNED1Q8TER0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SNED1Q8TER0 LINC00304-203ENST00000565008 1864 ntBASIC20.8■□□□□ 0.92
SNED1Q8TER0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
SNED1Q8TER0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SNED1Q8TER0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.8■□□□□ 0.92
SNED1Q8TER0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.8■□□□□ 0.92
SNED1Q8TER0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNED1Q8TER0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 AC008267.7-201ENST00000624570 1194 ntBASIC20.79■□□□□ 0.92
SNED1Q8TER0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.79■□□□□ 0.92
SNED1Q8TER0 SLC22A20-204ENST00000530038 1673 ntBASIC20.79■□□□□ 0.92
SNED1Q8TER0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNED1Q8TER0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.78■□□□□ 0.92
SNED1Q8TER0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 CR383656.12-201ENST00000549567 513 ntBASIC20.78■□□□□ 0.92
SNED1Q8TER0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNED1Q8TER0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.78■□□□□ 0.92
SNED1Q8TER0 AC135050.7-201ENST00000624508 2218 ntBASIC20.78■□□□□ 0.92
SNED1Q8TER0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.77■□□□□ 0.92
SNED1Q8TER0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 AC012569.1-201ENST00000591191 1524 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms