Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC148Q8NFR7 AC093525.9-201ENST00000624961 1746 ntBASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 LAGE3P1-201ENST00000425356 484 ntBASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 AC139887.3-201ENST00000568585 713 ntBASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC148Q8NFR7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.89■□□□□ 0.78
CCDC148Q8NFR7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC148Q8NFR7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 AC018712.1-201ENST00000455767 687 ntBASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 RNPS1P1-201ENST00000507437 918 ntBASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 AP002469.2-201ENST00000531724 424 ntBASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 AL160237.2-201ENST00000556165 472 ntBASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 AC104692.2-201ENST00000603054 253 ntBASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 AC064862.7-201ENST00000604520 867 ntBASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC148Q8NFR7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 SLC25A1P3-201ENST00000395415 828 ntBASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 AL139424.1-201ENST00000607572 797 ntBASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 AC107918.4-202ENST00000641623 219 ntBASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 AL645608.8-201ENST00000606034 2086 ntBASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC148Q8NFR7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms