Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 AP005018.1-201ENST00000525475 301 ntBASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 MIR3909-201ENST00000579518 119 ntBASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 U1.21-201ENST00000580816 167 ntBASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KLHDC9Q8NEP7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 GK-202ENST00000378941 458 ntTSL 3 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 AC004890.2-204ENST00000481968 304 ntBASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.86■□□□□ 0.61
KLHDC9Q8NEP7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 CRB3P1-201ENST00000449338 276 ntBASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 AL031055.1-201ENST00000606362 631 ntBASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 SLC22A20-204ENST00000530038 1673 ntBASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
KLHDC9Q8NEP7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 MRPS18AP1-201ENST00000414458 589 ntBASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 MIR4453-201ENST00000584019 89 ntBASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KLHDC9Q8NEP7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms