Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 AP001094.4-201ENST00000579008 2176 ntBASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 AC011467.2-201ENST00000598425 242 ntBASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 AL358472.4-201ENST00000633140 710 ntBASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF439Q8NDP4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 AC116353.5-201ENST00000638148 1699 ntBASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
ZNF439Q8NDP4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 TOB2P1-201ENST00000469761 992 ntBASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 MIR3180-1-201ENST00000580374 94 ntBASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 MIR3180-3-201ENST00000584616 94 ntBASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 Z69720.1-201ENST00000601483 472 ntBASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 AL445228.2-201ENST00000605589 952 ntBASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 NPAP1P7-201ENST00000613027 823 ntBASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 AL365209.1-201ENST00000624418 6473 ntBASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF439Q8NDP4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF439Q8NDP4 KRT8P10-201ENST00000450021 1447 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms