Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COLGALT1Q8NBJ5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
COLGALT1Q8NBJ5 LETM1P2-201ENST00000597330 2178 ntBASIC18.58■□□□□ 0.57
COLGALT1Q8NBJ5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COLGALT1Q8NBJ5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COLGALT1Q8NBJ5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COLGALT1Q8NBJ5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COLGALT1Q8NBJ5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 TSEN15P1-201ENST00000423257 515 ntBASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 AC093028.1-201ENST00000622998 982 ntBASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COLGALT1Q8NBJ5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 AC092902.6-201ENST00000641783 218 ntBASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.57■□□□□ 0.56
COLGALT1Q8NBJ5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 AC134043.2-201ENST00000624206 2238 ntBASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 AL139400.1-201ENST00000366220 510 ntBASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 AC068137.2-201ENST00000605408 478 ntBASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
COLGALT1Q8NBJ5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
COLGALT1Q8NBJ5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms