Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 LINC02012-201ENST00000608206 1725 ntBASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAM1L1Q8N609 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 PAWRP1-201ENST00000451083 565 ntBASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 PI4KAP1-204ENST00000612579 1703 ntBASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAM1L1Q8N609 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 AL645608.8-201ENST00000606034 2086 ntBASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 AC145285.3-201ENST00000564603 959 ntBASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAM1L1Q8N609 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 LETM1P2-201ENST00000597330 2178 ntBASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAM1L1Q8N609 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAM1L1Q8N609 AC009947.1-201ENST00000444350 727 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms