Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 TUBB8P12-201ENST00000308911 1335 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 TUBB7P-202ENST00000428444 1305 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 TUBB8P7-204ENST00000567960 1332 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 CYP2T1P-202ENST00000641596 2535 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 PCDHA1-201ENST00000378133 2726 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 LIN28AP1-201ENST00000429574 405 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 AC145285.6-201ENST00000604632 637 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 AL390719.2-201ENST00000606993 987 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 PCDHB19P-201ENST00000570871 2371 ntBASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01561Q8N1V8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 AL136379.1-201ENST00000623471 2642 ntBASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 AC007967.3-201ENST00000434308 558 ntBASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 STK25P1-201ENST00000585406 838 ntBASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 GPR89P-201ENST00000407924 1495 ntBASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC01561Q8N1V8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms