Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM42Q8IWZ5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 CYP2T1P-202ENST00000641596 2535 ntBASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 TSPY14P-201ENST00000303979 915 ntBASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 SLC25A1P3-201ENST00000395415 828 ntBASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 EGLN1P1-201ENST00000531623 762 ntBASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM42Q8IWZ5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM42Q8IWZ5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 AP000523.1-201ENST00000398242 1049 ntBASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 AC128688.1-201ENST00000487626 519 ntBASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 AC005363.2-201ENST00000618631 242 ntBASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 AC078925.2-201ENST00000624013 1973 ntBASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRIM42Q8IWZ5 AC006449.5-201ENST00000610658 2098 ntBASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 AC092053.1-201ENST00000605787 1936 ntBASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM42Q8IWZ5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms