Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF259P1-201ENST00000407656 1365 ntBASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 AC012317.2-201ENST00000623305 2251 ntBASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM48Q8IWZ4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 SLC25A6P5-201ENST00000435663 894 ntBASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 AC098831.1-202ENST00000438821 336 ntBASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 RPL13AP23-201ENST00000480739 586 ntBASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 AC012640.2-201ENST00000561606 901 ntBASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 LINC01451-201ENST00000623792 534 ntBASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 AC005593.1-201ENST00000624894 515 ntBASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM48Q8IWZ4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 SLC25A1P1-201ENST00000528351 927 ntBASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 AP002414.3-201ENST00000589352 1468 ntBASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 AC097637.2-201ENST00000624096 1997 ntBASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM48Q8IWZ4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 AC067852.2-201ENST00000590513 2313 ntBASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 AL356488.2-201ENST00000602755 427 ntBASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms