Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 AC093525.9-201ENST00000624961 1746 ntBASIC17.65■□□□□ 0.42
CASC4Q6P4E1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 KRT18P21-201ENST00000515767 1272 ntBASIC17.65■□□□□ 0.42
CASC4Q6P4E1 KRT8P26-201ENST00000534154 1276 ntBASIC17.65■□□□□ 0.42
CASC4Q6P4E1 AL136038.3-201ENST00000561909 1096 ntBASIC17.65■□□□□ 0.42
CASC4Q6P4E1 AC019129.2-201ENST00000609837 1235 ntBASIC17.65■□□□□ 0.42
CASC4Q6P4E1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 AC046185.3-201ENST00000623228 1824 ntBASIC17.65■□□□□ 0.42
CASC4Q6P4E1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CASC4Q6P4E1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CASC4Q6P4E1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CASC4Q6P4E1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CASC4Q6P4E1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CASC4Q6P4E1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 AC111152.3-201ENST00000569699 673 ntBASIC17.64■□□□□ 0.41
CASC4Q6P4E1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASC4Q6P4E1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 VENTXP7-201ENST00000475503 772 ntBASIC17.63■□□□□ 0.41
CASC4Q6P4E1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 AC005336.2-201ENST00000593183 939 ntBASIC17.63■□□□□ 0.41
CASC4Q6P4E1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 AL138831.2-201ENST00000606564 490 ntBASIC17.63■□□□□ 0.41
CASC4Q6P4E1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.63■□□□□ 0.41
CASC4Q6P4E1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CASC4Q6P4E1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms