Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 HBZP1-201ENST00000354915 429 ntBASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 KRT89P-201ENST00000620027 1478 ntBASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM53Q6P2H8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 CICP4-201ENST00000447359 2812 ntBASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM53Q6P2H8 AC093677.2-201ENST00000600169 1863 ntBASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM53Q6P2H8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms