Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 RPSAP43-201ENST00000402237 625 ntBASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 UPF3AP3-201ENST00000420996 769 ntBASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 AC087163.2-201ENST00000457299 853 ntBASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 SLC25A6P2-201ENST00000497974 877 ntBASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 AC096734.2-201ENST00000562054 433 ntBASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 MIR1233-2-201ENST00000408138 82 ntBASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 MIR1233-1-201ENST00000408722 82 ntBASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 AC004877.2-201ENST00000623941 599 ntBASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SWSAP1Q6NVH7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 GPX1P2-201ENST00000429271 606 ntBASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 RHOQP3-201ENST00000437982 621 ntBASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 CXCL1P1-201ENST00000502804 216 ntBASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 MTDHP5-201ENST00000598980 586 ntBASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 AC055717.3-201ENST00000622967 595 ntBASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 AC002310.6-201ENST00000624451 1377 ntBASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.15■□□□□ 0.66
SWSAP1Q6NVH7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SWSAP1Q6NVH7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SWSAP1Q6NVH7 AC093525.9-201ENST00000624961 1746 ntBASIC19.14■□□□□ 0.66
SWSAP1Q6NVH7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms