Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 FRMD8P1-201ENST00000440433 1524 ntBASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AL121912.1-201ENST00000603683 238 ntBASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AL589182.2-201ENST00000619332 1049 ntBASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AL590787.1-201ENST00000568856 1315 ntBASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AC092068.3-201ENST00000587894 2016 ntBASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN20Q4JDL3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN20Q4JDL3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN20Q4JDL3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PTPN20Q4JDL3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.14■□□□□ 0.5
PTPN20Q4JDL3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 AD000864.1-201ENST00000624076 2295 ntBASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 AC124947.2-201ENST00000547118 1133 ntBASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 AL139424.1-201ENST00000607572 797 ntBASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PTPN20Q4JDL3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 AL121761.2-201ENST00000598007 1648 ntBASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms