Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC024243.1-201ENST00000609234 778 ntBASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 AC105917.1-201ENST00000506637 2539 ntBASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ANKRD55Q3KP44 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 MIR1238-201ENST00000408483 83 ntBASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 FITM1-202ENST00000559294 800 ntBASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 NAPSB-206ENST00000562112 1266 ntBASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ANKRD55Q3KP44 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 AC128688.1-201ENST00000487626 519 ntBASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 LINC01023-201ENST00000606054 436 ntBASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ANKRD55Q3KP44 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.36□□□□□ -0.11
ANKRD55Q3KP44 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms