Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.97□□□□□ -0.17
CX3CL1P78423 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CX3CL1P78423 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.97□□□□□ -0.17
CX3CL1P78423 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.97□□□□□ -0.17
CX3CL1P78423 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CX3CL1P78423 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.97□□□□□ -0.17
CX3CL1P78423 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CL1P78423 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.96□□□□□ -0.17
CX3CL1P78423 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CX3CL1P78423 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CX3CL1P78423 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CL1P78423 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CX3CL1P78423 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CL1P78423 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CL1P78423 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.96□□□□□ -0.17
CX3CL1P78423 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CL1P78423 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.96□□□□□ -0.17
CX3CL1P78423 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.96□□□□□ -0.17
CX3CL1P78423 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.96□□□□□ -0.17
CX3CL1P78423 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CX3CL1P78423 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.96□□□□□ -0.17
CX3CL1P78423 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CX3CL1P78423 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CX3CL1P78423 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CL1P78423 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CX3CL1P78423 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.96□□□□□ -0.18
CX3CL1P78423 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CX3CL1P78423 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CX3CL1P78423 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.96□□□□□ -0.18
CX3CL1P78423 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
CX3CL1P78423 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CX3CL1P78423 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CX3CL1P78423 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
CX3CL1P78423 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CX3CL1P78423 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CX3CL1P78423 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CX3CL1P78423 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CX3CL1P78423 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CX3CL1P78423 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.95□□□□□ -0.18
CX3CL1P78423 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CX3CL1P78423 RCN1P2-201ENST00000398357 915 ntBASIC13.95□□□□□ -0.18
CX3CL1P78423 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CL1P78423 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.95□□□□□ -0.18
CX3CL1P78423 IGHV3-52-201ENST00000519770 353 ntBASIC13.95□□□□□ -0.18
CX3CL1P78423 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.95□□□□□ -0.18
CX3CL1P78423 AC109462.3-201ENST00000573934 613 ntBASIC13.95□□□□□ -0.18
CX3CL1P78423 MIR3652-201ENST00000579335 131 ntBASIC13.95□□□□□ -0.18
CX3CL1P78423 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.95□□□□□ -0.18
CX3CL1P78423 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.95□□□□□ -0.18
CX3CL1P78423 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.95□□□□□ -0.18
CX3CL1P78423 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CL1P78423 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.95□□□□□ -0.18
CX3CL1P78423 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CL1P78423 AL138688.1-201ENST00000624851 1594 ntBASIC13.95□□□□□ -0.18
CX3CL1P78423 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CX3CL1P78423 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CL1P78423 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.95□□□□□ -0.18
CX3CL1P78423 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CX3CL1P78423 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CX3CL1P78423 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms