Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 RCC2P3-201ENST00000418112 1537 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 AC006504.4-201ENST00000592118 1568 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 AP006294.1-201ENST00000415407 339 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 AL592309.1-201ENST00000443127 649 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 KRT223P-202ENST00000449164 1292 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 SPDYE11-202ENST00000450699 704 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 SPDYE9P-201ENST00000570642 692 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 SPDYE10P-202ENST00000612005 668 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 SPDYE8P-202ENST00000612377 668 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 AC133552.6-201ENST00000613406 534 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 MIR6869-201ENST00000619434 62 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 KRT8P47-201ENST00000604727 1398 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RIPPLY3P57055 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 AC005332.7-201ENST00000614046 2005 ntBASIC14.31□□□□□ -0.12
RIPPLY3P57055 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIPPLY3P57055 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AL391005.1-201ENST00000623953 2435 ntBASIC14.3□□□□□ -0.12
RIPPLY3P57055 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 MTCL1P1-201ENST00000446207 792 ntBASIC14.3□□□□□ -0.12
RIPPLY3P57055 SPTLC1P1-201ENST00000447199 261 ntBASIC14.3□□□□□ -0.12
RIPPLY3P57055 RN7SL752P-201ENST00000463779 287 ntBASIC14.3□□□□□ -0.12
RIPPLY3P57055 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AD001527.2-201ENST00000622994 785 ntBASIC14.3□□□□□ -0.12
RIPPLY3P57055 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AC139713.2-201ENST00000641328 2723 ntBASIC14.3□□□□□ -0.12
RIPPLY3P57055 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIPPLY3P57055 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RIPPLY3P57055 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.29□□□□□ -0.12
RIPPLY3P57055 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms