Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN20P56880 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CLDN20P56880 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 PCDHB19P-201ENST00000570871 2371 ntBASIC15.88■□□□□ 0.13
CLDN20P56880 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN20P56880 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.88■□□□□ 0.13
CLDN20P56880 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CLDN20P56880 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN20P56880 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CLDN20P56880 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.88■□□□□ 0.13
CLDN20P56880 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLDN20P56880 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN20P56880 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN20P56880 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLDN20P56880 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN20P56880 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN20P56880 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN20P56880 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN20P56880 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CLDN20P56880 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.87■□□□□ 0.13
CLDN20P56880 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.87■□□□□ 0.13
CLDN20P56880 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN20P56880 AC106795.1-205ENST00000512851 1056 ntBASIC15.87■□□□□ 0.13
CLDN20P56880 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 AL121912.1-201ENST00000603683 238 ntBASIC15.87■□□□□ 0.13
CLDN20P56880 AC008608.2-201ENST00000606089 416 ntBASIC15.87■□□□□ 0.13
CLDN20P56880 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
CLDN20P56880 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CLDN20P56880 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.87■□□□□ 0.13
CLDN20P56880 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 AC006116.8-202ENST00000587620 1550 ntBASIC15.87■□□□□ 0.13
CLDN20P56880 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
CLDN20P56880 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLDN20P56880 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.86■□□□□ 0.13
CLDN20P56880 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN20P56880 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 AP005117.1-201ENST00000584346 1413 ntBASIC15.86■□□□□ 0.13
CLDN20P56880 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN20P56880 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN20P56880 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN20P56880 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 AC103564.2-201ENST00000432853 1299 ntBASIC15.86■□□□□ 0.13
CLDN20P56880 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN20P56880 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.86■□□□□ 0.13
CLDN20P56880 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN20P56880 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.86■□□□□ 0.13
CLDN20P56880 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.86■□□□□ 0.13
CLDN20P56880 MTDHP3-201ENST00000594186 672 ntBASIC15.86■□□□□ 0.13
CLDN20P56880 AC104692.2-201ENST00000603054 253 ntBASIC15.86■□□□□ 0.13
CLDN20P56880 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN20P56880 AL355877.3-201ENST00000622820 899 ntBASIC15.86■□□□□ 0.13
CLDN20P56880 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.86■□□□□ 0.13
CLDN20P56880 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CLDN20P56880 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLDN20P56880 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLDN20P56880 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms