Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.01■□□□□ 0.63
PEX3P56589 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.01■□□□□ 0.63
PEX3P56589 PTCHD3P3-201ENST00000403073 906 ntBASIC19.01■□□□□ 0.63
PEX3P56589 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.01■□□□□ 0.63
PEX3P56589 IGHV3-22-201ENST00000520721 359 ntBASIC19.01■□□□□ 0.63
PEX3P56589 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.01■□□□□ 0.63
PEX3P56589 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.01■□□□□ 0.63
PEX3P56589 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.01■□□□□ 0.63
PEX3P56589 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 AC120114.3-201ENST00000611923 658 ntBASIC19.01■□□□□ 0.63
PEX3P56589 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.01■□□□□ 0.63
PEX3P56589 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PEX3P56589 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.01■□□□□ 0.63
PEX3P56589 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PEX3P56589 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PEX3P56589 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.01■□□□□ 0.63
PEX3P56589 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PEX3P56589 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PEX3P56589 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.01■□□□□ 0.63
PEX3P56589 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PEX3P56589 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19■□□□□ 0.63
PEX3P56589 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19■□□□□ 0.63
PEX3P56589 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PEX3P56589 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19■□□□□ 0.63
PEX3P56589 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PEX3P56589 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
PEX3P56589 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PEX3P56589 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19■□□□□ 0.63
PEX3P56589 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19■□□□□ 0.63
PEX3P56589 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19■□□□□ 0.63
PEX3P56589 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19■□□□□ 0.63
PEX3P56589 BX640515.1-201ENST00000617215 977 ntBASIC19■□□□□ 0.63
PEX3P56589 AC005593.1-201ENST00000624894 515 ntBASIC19■□□□□ 0.63
PEX3P56589 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PEX3P56589 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PEX3P56589 AL645608.8-201ENST00000606034 2086 ntBASIC19■□□□□ 0.63
PEX3P56589 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PEX3P56589 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19■□□□□ 0.63
PEX3P56589 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19■□□□□ 0.63
PEX3P56589 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19■□□□□ 0.63
PEX3P56589 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PEX3P56589 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.99■□□□□ 0.63
PEX3P56589 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PEX3P56589 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.99■□□□□ 0.63
PEX3P56589 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.99■□□□□ 0.63
PEX3P56589 RPS15P9-201ENST00000494093 319 ntBASIC18.99■□□□□ 0.63
PEX3P56589 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.99■□□□□ 0.63
PEX3P56589 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.99■□□□□ 0.63
PEX3P56589 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
PEX3P56589 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.99■□□□□ 0.63
PEX3P56589 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PEX3P56589 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.99■□□□□ 0.63
PEX3P56589 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.99■□□□□ 0.63
PEX3P56589 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.99■□□□□ 0.63
PEX3P56589 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PEX3P56589 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.99■□□□□ 0.63
PEX3P56589 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PEX3P56589 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PEX3P56589 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 AC108860.2-201ENST00000562760 2183 ntBASIC18.98■□□□□ 0.63
PEX3P56589 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEX3P56589 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PEX3P56589 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms