Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCKAP1LP55160 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 AP001094.4-201ENST00000579008 2176 ntBASIC18.86■□□□□ 0.61
NCKAP1LP55160 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.86■□□□□ 0.61
NCKAP1LP55160 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 UNC93B6-202ENST00000528242 690 ntBASIC18.86■□□□□ 0.61
NCKAP1LP55160 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 BX640515.1-201ENST00000617215 977 ntBASIC18.86■□□□□ 0.61
NCKAP1LP55160 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 AF228730.7-201ENST00000641842 219 ntBASIC18.86■□□□□ 0.61
NCKAP1LP55160 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
NCKAP1LP55160 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 AC092053.1-201ENST00000605787 1936 ntBASIC18.86■□□□□ 0.61
NCKAP1LP55160 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCKAP1LP55160 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 RNA5SP415-201ENST00000517246 115 ntBASIC18.85■□□□□ 0.61
NCKAP1LP55160 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NCKAP1LP55160 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCKAP1LP55160 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NCKAP1LP55160 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NCKAP1LP55160 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NCKAP1LP55160 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 PI4KAP1-204ENST00000612579 1703 ntBASIC18.84■□□□□ 0.61
NCKAP1LP55160 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 AL590627.1-203ENST00000421194 1026 ntBASIC18.84■□□□□ 0.61
NCKAP1LP55160 AC009947.1-201ENST00000444350 727 ntBASIC18.84■□□□□ 0.61
NCKAP1LP55160 AC108073.2-201ENST00000464002 357 ntBASIC18.84■□□□□ 0.61
NCKAP1LP55160 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 DUX4L17-201ENST00000557360 1267 ntBASIC18.84■□□□□ 0.61
NCKAP1LP55160 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.84■□□□□ 0.61
NCKAP1LP55160 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NCKAP1LP55160 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.84■□□□□ 0.61
NCKAP1LP55160 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCKAP1LP55160 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.84■□□□□ 0.61
NCKAP1LP55160 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NCKAP1LP55160 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NCKAP1LP55160 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
NCKAP1LP55160 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
NCKAP1LP55160 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NCKAP1LP55160 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NCKAP1LP55160 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms