Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF140P52738 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF140P52738 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.16■□□□□ 0.34
ZNF140P52738 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF140P52738 AC107918.4-202ENST00000641623 219 ntBASIC17.16■□□□□ 0.34
ZNF140P52738 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ZNF140P52738 PCDHA12-202ENST00000613593 2588 ntBASIC17.16■□□□□ 0.34
ZNF140P52738 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZNF140P52738 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF140P52738 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF140P52738 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
ZNF140P52738 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZNF140P52738 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZNF140P52738 AC092068.3-201ENST00000587894 2016 ntBASIC17.15■□□□□ 0.34
ZNF140P52738 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.15■□□□□ 0.34
ZNF140P52738 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
ZNF140P52738 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF140P52738 AP002414.1-201ENST00000391405 1147 ntBASIC17.15■□□□□ 0.34
ZNF140P52738 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.15■□□□□ 0.34
ZNF140P52738 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF140P52738 DUX4L17-201ENST00000557360 1267 ntBASIC17.15■□□□□ 0.34
ZNF140P52738 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF140P52738 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF140P52738 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZNF140P52738 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF140P52738 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF140P52738 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF140P52738 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.14■□□□□ 0.34
ZNF140P52738 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 AC004870.1-201ENST00000315132 882 ntBASIC17.14■□□□□ 0.33
ZNF140P52738 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 ELK2BP-201ENST00000415014 1224 ntBASIC17.14■□□□□ 0.33
ZNF140P52738 FAAHP1-202ENST00000446499 1238 ntBASIC17.14■□□□□ 0.33
ZNF140P52738 AC018712.1-201ENST00000455767 687 ntBASIC17.14■□□□□ 0.33
ZNF140P52738 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF140P52738 AC073648.2-201ENST00000510116 352 ntBASIC17.14■□□□□ 0.33
ZNF140P52738 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF140P52738 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF140P52738 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF140P52738 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 AL031008.1-201ENST00000619963 541 ntBASIC17.14■□□□□ 0.33
ZNF140P52738 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ZNF140P52738 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF140P52738 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
ZNF140P52738 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ZNF140P52738 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF140P52738 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms