Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
GPC3P51654 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.05■□□□□ 0.64
GPC3P51654 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.05■□□□□ 0.64
GPC3P51654 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
GPC3P51654 AC002347.1-201ENST00000569543 541 ntBASIC19.05■□□□□ 0.64
GPC3P51654 AC010327.4-202ENST00000591484 748 ntBASIC19.05■□□□□ 0.64
GPC3P51654 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
GPC3P51654 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 PP12613-201ENST00000424958 2230 ntBASIC19.05■□□□□ 0.64
GPC3P51654 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
GPC3P51654 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC3P51654 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
GPC3P51654 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.04■□□□□ 0.64
GPC3P51654 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.04■□□□□ 0.64
GPC3P51654 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GPC3P51654 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.04■□□□□ 0.64
GPC3P51654 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
GPC3P51654 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 RPSAP43-201ENST00000402237 625 ntBASIC19.04■□□□□ 0.64
GPC3P51654 UPF3AP3-201ENST00000420996 769 ntBASIC19.04■□□□□ 0.64
GPC3P51654 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.04■□□□□ 0.64
GPC3P51654 GPX1P2-201ENST00000429271 606 ntBASIC19.04■□□□□ 0.64
GPC3P51654 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.04■□□□□ 0.64
GPC3P51654 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.04■□□□□ 0.64
GPC3P51654 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.04■□□□□ 0.64
GPC3P51654 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.04■□□□□ 0.64
GPC3P51654 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
GPC3P51654 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.04■□□□□ 0.64
GPC3P51654 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
GPC3P51654 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GPC3P51654 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GPC3P51654 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
GPC3P51654 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.03■□□□□ 0.64
GPC3P51654 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.03■□□□□ 0.64
GPC3P51654 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
GPC3P51654 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
GPC3P51654 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 MRPL20P1-201ENST00000400819 433 ntBASIC19.03■□□□□ 0.64
GPC3P51654 IGLL3P-201ENST00000412472 434 ntBASIC19.03■□□□□ 0.64
GPC3P51654 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.03■□□□□ 0.64
GPC3P51654 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.03■□□□□ 0.64
GPC3P51654 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.03■□□□□ 0.64
GPC3P51654 OR7E47P-204ENST00000575924 449 ntBASIC19.03■□□□□ 0.64
GPC3P51654 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.03■□□□□ 0.64
GPC3P51654 AC010654.1-201ENST00000615722 808 ntBASIC19.03■□□□□ 0.64
GPC3P51654 GGTLC5P-201ENST00000617623 998 ntBASIC19.03■□□□□ 0.64
GPC3P51654 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
GPC3P51654 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.03■□□□□ 0.64
GPC3P51654 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
GPC3P51654 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.03■□□□□ 0.64
GPC3P51654 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.03■□□□□ 0.64
GPC3P51654 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.03■□□□□ 0.64
GPC3P51654 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GPC3P51654 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GPC3P51654 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC3P51654 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.02■□□□□ 0.64
GPC3P51654 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GPC3P51654 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GPC3P51654 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GPC3P51654 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC3P51654 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GPC3P51654 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms