Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBP50607 MIR1199-201ENST00000621445 119 ntBASIC18.22■□□□□ 0.51
TUBP50607 AC004706.3-202ENST00000621574 984 ntBASIC18.22■□□□□ 0.51
TUBP50607 LINC01451-201ENST00000623792 534 ntBASIC18.22■□□□□ 0.51
TUBP50607 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBP50607 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
TUBP50607 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBP50607 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TUBP50607 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TUBP50607 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TUBP50607 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBP50607 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBP50607 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBP50607 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TUBP50607 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 AC073621.1-201ENST00000392730 636 ntBASIC18.21■□□□□ 0.51
TUBP50607 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.21■□□□□ 0.51
TUBP50607 KRT18P58-201ENST00000527480 1120 ntBASIC18.21■□□□□ 0.51
TUBP50607 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBP50607 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBP50607 AL356488.2-201ENST00000602755 427 ntBASIC18.21■□□□□ 0.51
TUBP50607 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TUBP50607 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBP50607 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBP50607 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TUBP50607 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TUBP50607 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.21■□□□□ 0.5
TUBP50607 AP002414.3-201ENST00000589352 1468 ntBASIC18.2■□□□□ 0.5
TUBP50607 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TUBP50607 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBP50607 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBP50607 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 AL355312.1-201ENST00000407115 2176 ntBASIC18.2■□□□□ 0.5
TUBP50607 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TUBP50607 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBP50607 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBP50607 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TUBP50607 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBP50607 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBP50607 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBP50607 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBP50607 AC136632.2-201ENST00000512891 861 ntBASIC18.2■□□□□ 0.5
TUBP50607 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBP50607 Z83851.2-201ENST00000609564 659 ntBASIC18.2■□□□□ 0.5
TUBP50607 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBP50607 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBP50607 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
TUBP50607 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBP50607 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBP50607 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBP50607 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBP50607 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBP50607 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBP50607 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBP50607 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBP50607 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.19■□□□□ 0.5
TUBP50607 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBP50607 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TUBP50607 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBP50607 AC117500.6-201ENST00000624871 588 ntBASIC18.19■□□□□ 0.5
TUBP50607 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBP50607 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TUBP50607 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms