Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SLC1A6P48664 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A6P48664 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SLC1A6P48664 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A6P48664 FAM8A6P-201ENST00000407496 1135 ntBASIC17.02■□□□□ 0.32
SLC1A6P48664 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A6P48664 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A6P48664 AC109462.3-201ENST00000573934 613 ntBASIC17.02■□□□□ 0.32
SLC1A6P48664 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A6P48664 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.02■□□□□ 0.32
SLC1A6P48664 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A6P48664 AC019129.2-201ENST00000609837 1235 ntBASIC17.02■□□□□ 0.32
SLC1A6P48664 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC1A6P48664 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.02■□□□□ 0.32
SLC1A6P48664 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SLC1A6P48664 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A6P48664 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A6P48664 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.02■□□□□ 0.31
SLC1A6P48664 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SLC1A6P48664 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A6P48664 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A6P48664 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A6P48664 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SLC1A6P48664 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A6P48664 CYP2T1P-202ENST00000641596 2535 ntBASIC17.02■□□□□ 0.31
SLC1A6P48664 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A6P48664 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SLC1A6P48664 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.02■□□□□ 0.31
SLC1A6P48664 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
SLC1A6P48664 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SLC1A6P48664 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC1A6P48664 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC1A6P48664 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SLC1A6P48664 ZNF444P1-201ENST00000559497 298 ntBASIC17.01■□□□□ 0.31
SLC1A6P48664 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC1A6P48664 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC1A6P48664 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC1A6P48664 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC1A6P48664 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC1A6P48664 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC1A6P48664 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 KRT18P22-201ENST00000402024 1347 ntBASIC17■□□□□ 0.31
SLC1A6P48664 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SLC1A6P48664 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17■□□□□ 0.31
SLC1A6P48664 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SLC1A6P48664 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SLC1A6P48664 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17■□□□□ 0.31
SLC1A6P48664 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 SPDYE15P-201ENST00000424157 909 ntBASIC17■□□□□ 0.31
SLC1A6P48664 EGFEM1P-202ENST00000431685 1563 ntBASIC17■□□□□ 0.31
SLC1A6P48664 SAPCD2P2-201ENST00000431719 1174 ntBASIC17■□□□□ 0.31
SLC1A6P48664 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17■□□□□ 0.31
SLC1A6P48664 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 MIR4497-201ENST00000583208 89 ntBASIC17■□□□□ 0.31
SLC1A6P48664 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17■□□□□ 0.31
SLC1A6P48664 GPR32P1-201ENST00000601788 811 ntBASIC17■□□□□ 0.31
SLC1A6P48664 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
SLC1A6P48664 FER1L4-210ENST00000615531 5998 ntBASIC17■□□□□ 0.31
SLC1A6P48664 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17■□□□□ 0.31
SLC1A6P48664 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17■□□□□ 0.31
SLC1A6P48664 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms