Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A3P43003 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC1A3P43003 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC1A3P43003 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC1A3P43003 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SLC1A3P43003 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
SLC1A3P43003 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC1A3P43003 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A3P43003 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 UPK3BP1-201ENST00000428678 509 ntBASIC15.91■□□□□ 0.14
SLC1A3P43003 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC1A3P43003 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC1A3P43003 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC1A3P43003 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC1A3P43003 STK25P1-201ENST00000585406 838 ntBASIC15.91■□□□□ 0.14
SLC1A3P43003 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC1A3P43003 AC114341.1-201ENST00000618070 349 ntBASIC15.91■□□□□ 0.14
SLC1A3P43003 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.91■□□□□ 0.14
SLC1A3P43003 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A3P43003 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A3P43003 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC1A3P43003 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC1A3P43003 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 AGGF1P2-201ENST00000426656 2106 ntBASIC15.91■□□□□ 0.14
SLC1A3P43003 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC1A3P43003 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC1A3P43003 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SLC1A3P43003 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC1A3P43003 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC1A3P43003 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC1A3P43003 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A3P43003 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC1A3P43003 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.9■□□□□ 0.14
SLC1A3P43003 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC1A3P43003 RCN1P2-201ENST00000398357 915 ntBASIC15.9■□□□□ 0.14
SLC1A3P43003 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC1A3P43003 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A3P43003 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A3P43003 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A3P43003 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SLC1A3P43003 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A3P43003 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC1A3P43003 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC1A3P43003 AD001527.2-201ENST00000622994 785 ntBASIC15.9■□□□□ 0.14
SLC1A3P43003 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC1A3P43003 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC1A3P43003 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC1A3P43003 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC1A3P43003 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLC1A3P43003 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC1A3P43003 AC046185.3-201ENST00000623228 1824 ntBASIC15.89■□□□□ 0.13
SLC1A3P43003 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC1A3P43003 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC1A3P43003 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC1A3P43003 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC1A3P43003 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC1A3P43003 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC1A3P43003 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SLC1A3P43003 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC1A3P43003 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms