Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.5■□□□□ 0.39
HADHAP40939 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HADHAP40939 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 NUS1P2-201ENST00000417358 873 ntBASIC17.5■□□□□ 0.39
HADHAP40939 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.5■□□□□ 0.39
HADHAP40939 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.5■□□□□ 0.39
HADHAP40939 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.5■□□□□ 0.39
HADHAP40939 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.5■□□□□ 0.39
HADHAP40939 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.5■□□□□ 0.39
HADHAP40939 MIR5100-201ENST00000579544 119 ntBASIC17.5■□□□□ 0.39
HADHAP40939 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.5■□□□□ 0.39
HADHAP40939 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.5■□□□□ 0.39
HADHAP40939 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.5■□□□□ 0.39
HADHAP40939 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.5■□□□□ 0.39
HADHAP40939 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HADHAP40939 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HADHAP40939 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HADHAP40939 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
HADHAP40939 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HADHAP40939 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.5■□□□□ 0.39
HADHAP40939 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
HADHAP40939 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.5■□□□□ 0.39
HADHAP40939 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HADHAP40939 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.49■□□□□ 0.39
HADHAP40939 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.49■□□□□ 0.39
HADHAP40939 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HADHAP40939 AC003669.1-201ENST00000334569 611 ntBASIC17.49■□□□□ 0.39
HADHAP40939 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HADHAP40939 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.49■□□□□ 0.39
HADHAP40939 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 KRT126P-201ENST00000549467 1181 ntBASIC17.49■□□□□ 0.39
HADHAP40939 STK25P1-201ENST00000585406 838 ntBASIC17.49■□□□□ 0.39
HADHAP40939 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.49■□□□□ 0.39
HADHAP40939 AC138894.3-201ENST00000603787 634 ntBASIC17.49■□□□□ 0.39
HADHAP40939 AL591684.3-201ENST00000605187 298 ntBASIC17.49■□□□□ 0.39
HADHAP40939 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.49■□□□□ 0.39
HADHAP40939 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.49■□□□□ 0.39
HADHAP40939 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HADHAP40939 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HADHAP40939 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.49■□□□□ 0.39
HADHAP40939 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HADHAP40939 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.48■□□□□ 0.39
HADHAP40939 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.48■□□□□ 0.39
HADHAP40939 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.48■□□□□ 0.39
HADHAP40939 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HADHAP40939 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.48■□□□□ 0.39
HADHAP40939 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.48■□□□□ 0.39
HADHAP40939 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.48■□□□□ 0.39
HADHAP40939 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.48■□□□□ 0.39
HADHAP40939 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.48■□□□□ 0.39
HADHAP40939 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.48■□□□□ 0.39
HADHAP40939 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.48■□□□□ 0.39
HADHAP40939 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.48■□□□□ 0.39
HADHAP40939 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
HADHAP40939 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HADHAP40939 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HADHAP40939 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms